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Putrescine importer PuuP

ABSTRACT A phenanthrene degrader, Mycobacterium sp. EPa45, was isolated from a phenanthrene-degrading consortium. Here, we report the complete genome sequence of EPa45, which has a 6.2-Mb single circular chromosome. We propose a phenanthrene degradation pathway in EPa45 based on the complete genome sequence.
www.uniprot.org

Quasi Importance Sampling

There arise two problems when the expectation of some function with respect to a nonuniform multivariate distribution has to be computed by (quasi-) Monte Carlo integration: the integrand can have singularities when the domain of the distribution is unbounded and it can be very expensive or even impossible to sample points from a general multivariate distribution. We show that importance sampling is a simple method to overcome both problems. (author's abstract)
research.wu.ac.at

Putrescine importer PuuP

Plants are host to diverse microbiome that might have co-evolved since millions of years. This resident microbiota can act as extended genome by contributing in plant growth, development and protection from biotic and abiotic stresses. Rice (Oryza Sativa) is a staple food consumed by more than 50% of the world's population. Herein we targeted the bacterial community associated with the healthy rice seeds. In this direction, we isolated and carried out whole genome sequencing of 100 bacterial iso
www.uniprot.org

What is “important”?

The use of the word "important" in scientific publications is growing. Scientists are invited to avoid it when writing scientific articles. Editors and reviewers, as well, should also pay attention.
hal.inrae.fr

Putrescine importer PuuP

We provide the genome sequences of the type strains of the polychlorophenol-degrading Mycobacterium chlorophenolicum (DSM43826), the degrader of chlorinated aliphatics Mycobacterium chubuense (DSM44219) and Mycobacterium obuense (DSM44075) that has been tested for use in cancer immunotherapy. The genome sizes of M. chlorophenolicum, M. chubuense, and M. obuense are 6.93, 5.95, and 5.58 Mb with GC-contents of 68.4%, 69.2%, and 67.9%, respectively. Comparative genomic analysis revealed that 3,254
www.uniprot.org

Very important changes

academic.oup.com

Putrescine importer PuuP

ABSTRACT Nesterenkonia sp. strain PF2B19, a psychrophilic bacterium, was isolated from 44,800-year-old permafrost. The draft genome sequence of this strain revealed the presence of genes involved in the production of cold active enzymes, carotenoid biosynthesis, fatty acid biosynthesis, and resistance to heavy metals. These results show the immense potential of the strain.
www.uniprot.org

Data Import by CI Job

A data import is part of most of our projects and in some cases, we need to re-import all the data from time to time. This post shows how you can delegate this task to a GitLab CI job and start it by adding a certain keyword to your commit message. What is the problem? There are several circumstances when a data import (or a re-import) is required.
lab.sub.uni-goettingen.de