ICLR

Summary The halophilic γ‐proteobacterium Halomonas elongata DSM 2581 T thrives at high salinity by synthesizing and accumulating the compatible solute ectoine. Ectoine levels are highly regulated according to external salt levels but the overall picture of its metabolism and control is not well unde

Editorial

Pseudomonas fluorescens F113 is a plant growth-promoting rhizobacterium (PGPR) that has biocontrol activity against fungal plant pathogens and is a model for rhizosphere colonization. Here, we present its complete genome sequence, which shows that besides a core genome very similar to those of other strains sequenced within this species, F113 possesses a wide array of genes encoding specialized functions for thriving in the rhizosphere and interacting with eukaryotic organisms.

Checkpoints of RetroBridge, ForwardBridge and DiGress models used in the paper.

ABSTRACT Pantoea ananatis is a Gram-negative plant pathogen that causes disease on a broad range of host plants, including pineapple, maize, rice, onion, melons, and Eucalyptus , and has been implicated in several cases of human disease. Here, we report the genome sequence of P. ananatis LMG20103 isola

ICLR 2022 Geometrical and Topological Representation Learning Talk

Abstract Phytoplankton are the primary producers of the sulfur-containing compatible solute dimethylsulfoniopropionate (DMSP). These cells are consumed by mesozooplankton, which, in turn, may be eaten by marine vertebrates. From the gut of one such animal, the Atlantic Herring Clupea harengus, we isolated strains of the γ-proteobacteria Pseudomonas and Psychrobacter that grew on DMSP as sole carbon source, and which produced the environmentally imp

The Ralstonia solanacearum species complex includes R. solanacearum, R. syzygii, and the Blood Disease Bacterium (BDB). All colonize plant xylem vessels and cause wilt diseases, but with significant biological differences. R. solanacearum is a soilborne bacterium that infects the roots of a broad range of plants. R. syzygii causes Sumatra disease of clove trees and is actively transmitted by cercopoid insects. BDB is also pathogenic to a single host, banana, and is transmitted by pollinating ins

Crystal structure of Thermotoga maritima 0065, a member of the IclR transcriptional factor family. - Kim Y, Zhang RG, Joachimiak A, Skarina T, Edwards A, Savchenko A, Midwest Center for Structural Genomics (MCSG) J Biol Chem (277) 19183-90 (2002)